We have removed the JMLSourceTaglet, this did not belong is this project and has been moved to the Java-ML machine learning library.
We added FrequencyMap, this class allows you to do quickly count how many of each item occurs.
Added constructor the JIntegerField without arguments
Fixed the output of AutoHelpCmdLineParser when only the long form is supplied
Delft University of Technology
Delft Bioinformatics Lab
Van Mourik Broekmanweg 6 (building 28)
2628 XE Delft
The Netherlands
http://bioinformatics.tudelft.nl/
Broad Institute of MIT and Harvard
Genome Sequencing and Analysis Program
7 Cambridge Center
Cambridge, MA, 02142
USA
http://www.broadinstitute.org